{ "_id": "6a1ccfae1d7bb097a0a34cdf", "Package": "spNNGP", "Title": "Spatial Regression Models for Large Datasets using Nearest\nNeighbor Gaussian Processes", "Version": "1.0.2", "Date": "2026-05-27", "Authors@R": "c(person(\"Andrew\", \"Finley\", role=c(\"aut\", \"cre\"), email=\"finleya@msu.edu\"), person(\"Abhirup\", \"Datta\", role=\"aut\", email=\"abhidatta@jhu.edu\"), person(\"Sudipto\", \"Banerjee\", role=\"aut\", email=\"sudipto@ucla.edu\"))", "Maintainer": "Andrew Finley ", "Author": "Andrew Finley [aut, cre], Abhirup Datta [aut], Sudipto Banerjee\n[aut]", "Description": "Fits univariate Bayesian spatial regression models for\nlarge datasets using Nearest Neighbor Gaussian Processes (NNGP)\ndetailed in Finley, Datta, Banerjee (2022)\n, Finley, Datta, Cook, Morton,\nAndersen, and Banerjee (2019)\n, and Datta, Banerjee,\nFinley, and Gelfand (2016) .", "License": "GPL (>= 2)", "Encoding": "UTF-8", "URL": "https://www.finley-lab.com/, https://github.com/finleya/spNNGP,\nhttps://finleya.github.io/spNNGP/", "BugReports": "https://github.com/finleya/spNNGP/issues", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-01 00:13:40 UTC", "User": "root" }, "Config/testthat/edition": "3", "Repository": "https://finleya.r-universe.dev", "Date/Publication": "2026-05-31 23:52:18 UTC", "RemoteUrl": "https://github.com/finleya/spnngp", "RemoteRef": "HEAD", "RemoteSha": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "MD5sum": "c74934f0afb8b69bf15e8fc8197a242f", "_user": "finleya", "_type": "src", "_file": "spNNGP_1.0.2.tar.gz", "_fileid": "bcddb768447c08b3a8d0b7febfd514912ba6dc9dc14e20b5e29516eb4e85f4d9", "_filesize": 4200601, "_sha256": "bcddb768447c08b3a8d0b7febfd514912ba6dc9dc14e20b5e29516eb4e85f4d9", "_created": "2026-06-01T00:13:40.000Z", "_published": "2026-06-01T00:17:50.088Z", "_distro": "noble", "_jobs": [ { "job": 78768068430, "time": 135, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7321247898" }, { "job": 78768068433, "time": 120, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7321246243" }, { "job": 78768068423, "time": 111, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7321245288" }, { "job": 78768068424, "time": 120, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7321246345" }, { "job": 78768068456, "time": 125, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7321246687" }, { "job": 78768068457, "time": 208, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7321255641" }, { "job": 78768068450, "time": 106, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7321244662" }, { "job": 78768068472, "time": 171, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7321251621" }, { "job": 78767888379, "time": 175, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7321233418" }, { "job": 78768068402, "time": 111, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7321245421" }, { "job": 78768068437, "time": 115, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7321245590" }, { "job": 78768068431, "time": 101, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7321244235" }, { "job": 78768068425, "time": 107, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7321244955" } ], "_buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/finleya/spnngp", "_commit": { "id": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "author": "Andrew Finley ", "committer": "Andrew Finley ", "message": "Update spNNGP hex logo\n", "time": 1780271538 }, "_maintainer": { "name": "Andrew Finley", "email": "finleya@msu.edu", "login": "finleya", "description": "", "uuid": 9747462 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "coda", "role": "Depends" }, { "package": "Formula", "role": "Depends" }, { "package": "RANN", "role": "Depends" }, { "package": "methods", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "finleya", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2026-22", "n": 8 } ], "_tags": [], "_stars": 0, "_contributors": [ { "user": "finleya", "count": 8, "uuid": 9747462 } ], "_userbio": { "uuid": 9747462, "type": "user", "name": "Andrew Finley" }, "_downloads": { "count": 419, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/spNNGP" }, "_mentions": 1, "_devurl": "https://github.com/finleya/spnngp", "_pkgdown": "https://finleya.github.io/spNNGP/", "_searchresults": 114, "_topics": [ "openblas", "cpp", "openmp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/spNNGP.html", "manual.pdf" ], "_homeurl": "https://github.com/finleya/spnngp", "_realowner": "finleya", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2017-07-16" }, { "version": "0.1.1", "date": "2017-07-21" }, { "version": "0.1.2", "date": "2019-09-03" }, { "version": "0.1.3", "date": "2020-01-30" }, { "version": "0.1.4", "date": "2020-03-30" }, { "version": "0.1.5", "date": "2021-02-17" }, { "version": "0.1.6", "date": "2021-09-20" }, { "version": "0.1.7", "date": "2022-03-17" }, { "version": "0.1.8", "date": "2022-05-24" }, { "version": "1.0.0", "date": "2022-06-27" }, { "version": "1.0.1", "date": "2024-09-23" }, { "version": "1.0.2", "date": "2026-05-28" } ], "_exports": [ "PGLogit", "spConjNNGP", "spDiag", "spNNGP" ], "_datasets": [ { "name": "BCEF", "title": "Forest Canopy Height from NASA Goddard's LiDAR Hyperspectral and Thermal (G-LiHT) over Bonanza Creek Experimental Forest", "object": "BCEF", "file": "BCEF.rda", "class": [ "data.frame" ], "fields": [ "x", "y", "FCH", "PTC", "holdout" ], "rows": 188717, "table": true, "tojson": true }, { "name": "MI_TSCA", "title": "Occurrence of Tsuga canadensis (Eastern hemlock) in Michigan", "object": "MI_TSCA", "file": "MI_TSCA.rda", "class": [ "data.frame" ], "fields": [ "lat", "long", "TSCA", "MIN", "MAX", "SUP", "WIP", "AET", "DEF" ], "rows": 17743, "table": true, "tojson": true } ], "_help": [ { "page": "BCEF.rda", "title": "Forest Canopy Height from NASA Goddard's LiDAR Hyperspectral and Thermal (G-LiHT) over Bonanza Creek Experimental Forest", "topics": [ "BCEF" ] }, { "page": "MI_TSCA.rda", "title": "Occurrence of Tsuga canadensis (Eastern hemlock) in Michigan", "topics": [ "MI_TSCA" ] }, { "page": "PGLogit", "title": "Function for Fitting Logistic Models using Polya-Gamma Latent Variables", "topics": [ "PGLogit" ] }, { "page": "predict.NNGP", "title": "Function for prediction at new locations using 'NNGP' models.", "topics": [ "predict.NNGP" ] }, { "page": "print.spDiag", "title": "Methods for spDiag Object", "topics": [ "print.spDiag" ] }, { "page": "spConjNNGP", "title": "Function for Fitting Univariate Bayesian Conjugate Spatial Regression Models", "topics": [ "spConjNNGP" ] }, { "page": "spDiag", "title": "Model fit diagnostics", "topics": [ "spDiag" ] }, { "page": "spNNGP", "title": "Function for Fitting Univariate Bayesian Spatial Regression Models", "topics": [ "spNNGP" ] }, { "page": "summary.NNGP", "title": "Methods for NNGP and Derived Objects", "topics": [ "fitted.NNGP", "print.NNGP", "print.predict.NNGP", "residuals.NNGP", "summary.NNGP" ] }, { "page": "summary.PGLogit", "title": "Methods for PGLogit Object", "topics": [ "fitted.PGLogit", "print.PGLogit", "residuals.PGLogit", "summary.PGLogit" ] } ], "_pkglogo": "https://github.com/finleya/spnngp/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/finleya/spnngp/raw/HEAD/README.md", "_rundeps": [ "coda", "Formula", "lattice", "RANN" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" }, { "shlib": "libgomp", "package": "libgomp1", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "openmp", "homepage": "http://gcc.gnu.org/", "description": "GCC OpenMP (GOMP) support library" } ], "_score": 4.232996110392154, "_indexed": true, "_nocasepkg": "spnngp", "_universes": [ "finleya" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.2", "date": "2026-06-01T00:16:00.000Z", "distro": "noble", "arch": "aarch64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "47b5682e1a7001d3404bdc2e800efda9cfd0622961364f137a8587fc3f2b6a1f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.7.0", "os": "linux", "version": "1.0.2", "date": "2026-06-01T00:15:45.000Z", "distro": "noble", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "4a1693bde5419853c17266a16dd9fcc60c6734e3f620a44607ed8ff80caa78ad", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "linux", "version": "1.0.2", "date": "2026-06-01T00:15:40.000Z", "distro": "noble", "arch": "aarch64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "f63f3b184e3df38ed5d3295ac3ec529a5905f30aaf4466cc3043aab2e372491f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "linux", "version": "1.0.2", "date": "2026-06-01T00:15:45.000Z", "distro": "noble", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "e0686e9517fd07630444f04cfd476b560dbe5779daa04275088864e8e0fe7d76", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.5.3", "os": "mac", "version": "1.0.2", "date": "2026-06-01T00:15:43.000Z", "arch": "aarch64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "7bc7e947840ac47e599b024d87cda0ec661bb2528da5712642a6e849d81bd778", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.5.3", "os": "mac", "version": "1.0.2", "date": "2026-06-01T00:16:50.000Z", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "566bebc003438f61a6ce484317e5396bb74e0c025bc863da1ddf92dc87423c70", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "mac", "version": "1.0.2", "date": "2026-06-01T00:15:29.000Z", "arch": "aarch64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "34d757ffe95afac9500f31c36d20c19ba8b9dfc199efb83207b3718990932161", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "mac", "version": "1.0.2", "date": "2026-06-01T00:16:18.000Z", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "71fcf72940c8961c3124d953a95a5171fd38b85d494509df0bf1a370a18c6115", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.2", "date": "2026-06-01T00:15:51.000Z", "arch": "emscripten", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "cfe00ffa181176a8e29f56218f0b2d070033bfb570125fcc8adab6b5cba7a69f", "status": "success", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.7.0", "os": "win", "version": "1.0.2", "date": "2026-06-01T00:15:10.000Z", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "935cf052dc67c56230961c0ecfa244d47fe2696a5abd4c6f61125294d76a1472", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.5.3", "os": "win", "version": "1.0.2", "date": "2026-06-01T00:15:01.000Z", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "de06eeeb106cff0bb742a13f607293f4229f6de10946b8c8f030974ea875fd8e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" }, { "r": "4.6.0", "os": "win", "version": "1.0.2", "date": "2026-06-01T00:14:56.000Z", "arch": "x86_64", "commit": "04502476a68f0b71e8160e2aa5bde7c8f57992d9", "fileid": "9d8b9137a7c507b2fab5ec78b622e57f93e3083a4ca258b52da2b49218cf96e1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/finleya/actions/runs/26728508378" } ] }